Spirograph inspired visualization of ecological networks

Aus de_evolutionary_art_org
Wechseln zu: Navigation, Suche

Reference

Katayoon Etemad, Sheelagh Carpendale and Faramarz Samavati: Spirograph inspired visualization of ecological networks. In: Computational Aesthetics 2014.

DOI

http://dx.doi.org/10.1145/2630099.2630108

Abstract

Ecological networks are directed weighted graphs for representing direct and indirect relationships between species in ecosystems. These complex cyclic networks play an important role in understanding an ecosystem's dynamics. In this paper, we present a visualization layout inspired by Spirograph patterns, specifically designed for ecological networks. Our visualization supports both the direct and indirect quantities commonly required in ecological studies. The layout is circular to reflect the containment of the represented ecosystem and to clarify which connections are internal and which are external. In this layout, nodes are arranged along the circumference of a large circle as arcs, and edges are mapped to thorn-like shapes that represent the direction and the weight of the edge. Finally, we illustrate the use of this visualization on several example ecological networks.

Extended Abstract

Bibtex

@inproceedings{Etemad:2014:SIV:2630099.2630108,
author = {Etemad, Katayoon and Carpendale, Sheelagh and Samavati, Faramarz},
title = {Spirograph Inspired Visualization of Ecological Networks},
booktitle = {Proceedings of the Workshop on Computational Aesthetics},
series = {CAe '14},
year = {2014},
isbn = {978-1-4503-3019-0},
location = {Vancouver, British Columbia, Canada},
pages = {81--91},
numpages = {11},
url = {http://doi.acm.org/10.1145/2630099.2630108 http://de.evo-art.org/index.php?title=Spirograph_inspired_visualization_of_ecological_networks },
doi = {10.1145/2630099.2630108},
acmid = {2630108},
publisher = {ACM},
address = {New York, NY, USA},
keywords = {ecological network, visualization, weighted directed graph},
} 

Used References

Allesina, S., and Pascual, M. 2009. Food web models: A plea for groups. Ecology Letters 12, 7, 652--662.

Baird, D., and Ulanowicz, R. E. 1989. The seasonal dynamics of the chesapeake bay ecosystem. Ecological Monographs 59, 4, pp. 329--364.

Giuseppe Di Battista , Peter Eades , Roberto Tamassia , Ioannis G. Tollis, Graph Drawing: Algorithms for the Visualization of Graphs, Prentice Hall PTR, Upper Saddle River, NJ, 1998 http://dl.acm.org/citation.cfm?id=551884&CFID=588525319&CFTOKEN=29804931

Chris Bennett , Jody Ryall , Leo Spalteholz , Amy Gooch, The aesthetics of graph visualization, Proceedings of the Third Eurographics conference on Computational Aesthetics in Graphics, Visualization and Imaging, June 20-22, 2007, Alberta, Canada http://dx.doi.org/10.2312/COMPAESTH/COMPAESTH07/057-064

Nathalie Henry , Jean-Daniel Fekete, MatrixExplorer: a Dual-Representation System to Explore Social Networks, IEEE Transactions on Visualization and Computer Graphics, v.12 n.5, p.677-684, September 2006 http://dx.doi.org/10.1109/TVCG.2006.160

Nathalie Henry , Jean-Daniel Fekete , Michael J. McGuffin, NodeTrix: a Hybrid Visualization of Social Networks, IEEE Transactions on Visualization and Computer Graphics, v.13 n.6, p.1302-1309, November 2007 http://dx.doi.org/10.1109/TVCG.2007.70582

Ivan Herman , Guy Melançon , M. Scott Marshall, Graph Visualization and Navigation in Information Visualization: A Survey, IEEE Transactions on Visualization and Computer Graphics, v.6 n.1, p.24-43, January 2000 http://dx.doi.org/10.1109/2945.841119

Lars Erik Holmquist , Tobias Skog, Informative art: information visualization in everyday environments, Proceedings of the 1st international conference on Computer graphics and interactive techniques in Australasia and South East Asia, February 11-14, 2003, Melbourne, Australia http://doi.acm.org/10.1145/604471.604516

Danny Holten , Jarke J. van Wijk, A user study on visualizing directed edges in graphs, Proceedings of the SIGCHI Conference on Human Factors in Computing Systems, April 04-09, 2009, Boston, MA, USA http://doi.acm.org/10.1145/1518701.1519054

Danny Holten, Hierarchical Edge Bundles: Visualization of Adjacency Relations in Hierarchical Data, IEEE Transactions on Visualization and Computer Graphics, v.12 n.5, p.741-748, September 2006 http://dx.doi.org/10.1109/TVCG.2006.147

Jorgensen, S. E., and Fath, B. 2008. Encyclopedia of Ecology, Five-Volume Set, vol. 1. Newnes.

Krzywinski, M., Schein, J., Birol, İ., Connors, J., Gascoyne, R., Horsman, D., Jones, S. J., and Marra, M. A. 2009. Circos: an information aesthetic for comparative genomics. Genome research 19, 9, 1639--1645.

Leontief, W. 1987. Input-output analysis. The new palgrave. A dictionary of economics 2, 860--64.

Lin, Y., and Vuillemot, R. 2013. Spirograph designs for ambient display of tweets. Proceedings of the IEEE VIS Arts Program (VISAP).

Sean Lynch , Jonathan Haber , Sheelagh Carpendale, Special Section on CANS: ColourVis: Exploring colour in digital images, Computers and Graphics, v.36 n.6, p.696-707, October, 2012 http://dx.doi.org/10.1016/j.cag.2012.02.009

Miriah Meyer , Tamara Munzner , Hanspeter Pfister, MizBee: A Multiscale Synteny Browser, IEEE Transactions on Visualization and Computer Graphics, v.15 n.6, p.897-904, November 2009 http://dx.doi.org/10.1109/TVCG.2009.167

Miller, T., and Stasko, J. 2003. Infocanvas: A highly personalized, elegant awareness display. In Supporting Elegant Peripheral Awareness, workshop at CHI03, Citeseer.

Moritz, S., 2014. Wel-formed eigenfactor.

Zachary Pousman , John Stasko , Michael Mateas, Casual Information Visualization: Depictions of Data in Everyday Life, IEEE Transactions on Visualization and Computer Graphics, v.13 n.6, p.1145-1152, November 2007 http://dx.doi.org/10.1109/TVCG.2007.70541

Helen C. Purchase , Christopher Pilcher , Beryl Plimmer, Graph Drawing Aesthetics—Created by Users, Not Algorithms, IEEE Transactions on Visualization and Computer Graphics, v.18 n.1, p.81-92, January 2012 http://dx.doi.org/10.1109/TVCG.2010.269

Helen C. Purchase, Which Aesthetic has the Greatest Effect on Human Understanding?, Proceedings of the 5th International Symposium on Graph Drawing, p.248-261, September 18-20, 1997 http://dl.acm.org/citation.cfm?id=728779&CFID=588525319&CFTOKEN=29804931

Patrick Riehmann , Manfred Hanfler , Bernd Froehlich, Interactive Sankey Diagrams, Proceedings of the Proceedings of the 2005 IEEE Symposium on Information Visualization, p.31, October 23-25, 2005 http://dx.doi.org/10.1109/INFOVIS.2005.21

Tom, B., 2014. Guilloche pattern generator.

Robert E. Ulanowicz, Quantitative methods for ecological network analysis, Computational Biology and Chemistry, v.28 n.5-6, p.321-339, December, 2004 http://dx.doi.org/10.1016/j.compbiolchem.2004.09.001

Ulanowicz, R. E. 2013. Circumscribed Complexity in Ecological Networks. Wiley VCH Verlag GmbH and Co. KGaA, 249--258.

Von Landesberger, T., Kuijper, A., Schreck, T., Kohlhammer, J., van Wijk, J. J., Fekete, J.-D., and Fellner, D. W. 2011. Visual analysis of large graphs: State-of-the-art and future research challenges. In Computer graphics forum, vol. 30, Wiley Online Library, 1719--1749.

Wikipedia, 2014. Spirograph --- Wikipedia, the free encyclopedia. {Online; accessed 17-Apr-2014}.


Links

Full Text

http://innovis.cpsc.ucalgary.ca/innovis/uploads/Publications/Publications/Etemad2009MSc.pdf


intern file

Sonstige Links